Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  255 bits (652), Expect = 4e-72
 Identities = 132/299 (44%), Positives = 191/299 (63%), Gaps = 3/299 (1%)

Query: 139  KRVSQKLEEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQ 198
            KR  Q+L++     K L ++L +AQ QL+QSEKMASIGQL+AG+AHE+NNP+GF+ SNL 
Sbjct: 712  KRAEQELQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLG 771

Query: 199  TLSDYFNSLEKVLKSITQT-IGQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGS 257
            TL  Y   +  ++ +      G  +D    E+ +++  +   DF+  D  +L+ ES +G 
Sbjct: 772  TLDHYLREIFAIIAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGL 831

Query: 258  SRVMSIVKNLKEFSHVDRSEWSYANLENCIESTLKIINNEIKYNITLEKHYAANVPDVFC 317
             RV  I ++LK+FS    +E  +A+L   ++STL I+ NE+KY  T+ K Y   +P V+C
Sbjct: 832  ERVAKIARDLKDFSRAGEAESQWADLHQGLDSTLNIVWNELKYKCTVHKEYG-ELPLVWC 890

Query: 318  QPMQINQVLLNILVNASHAIKGEGTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEP 377
            +P QINQV +N+LVNA+ AI  +G I +     GD+ V + + D+GCGI  E   R+FEP
Sbjct: 891  EPSQINQVFMNLLVNAAQAIPKKGDIWLRTGRRGDE-VFVAVSDSGCGIAPEYLHRLFEP 949

Query: 378  FFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIRLPVNPSAEAVDNTDA 436
            FFTTKPVG GTGLGLS++Y I+ KH G + V SE G+GS FT+ LP+       + T+A
Sbjct: 950  FFTTKPVGKGTGLGLSLAYSIVQKHQGRLEVESEPGRGSTFTVWLPIEARPRPEEGTEA 1008