Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  260 bits (665), Expect = 9e-74
 Identities = 141/308 (45%), Positives = 203/308 (65%), Gaps = 13/308 (4%)

Query: 127 DVTIQASQQQELKRVSQKLEEEHQSQKVLIKKLEDAQGQLIQSEKMASIGQLSAGIAHEI 186
           DV  + + + EL++ + +L E +       K+L++AQ QL+QSEKMASIGQL+AG+AHEI
Sbjct: 433 DVRRREASENELRQRNAELLEVN-------KRLQEAQEQLVQSEKMASIGQLAAGVAHEI 485

Query: 187 NNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQ-SKDTALNEACQKILKQGQVDFILED 245
           NNP+G++ SNL TL  Y   ++ VL S+   + Q   +    +A  ++ +    DF+LED
Sbjct: 486 NNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLPSEHPAAQAVARVKQDLDFDFLLED 545

Query: 246 TAELITESLEGSSRVMSIVKNLKEFSHVDRSE-WSYANLENCIESTLKIINNEIKYNITL 304
              L+T+S +G  RV  IV +LK+FS +D S+ W +A+L   ++STL I+NNEIKY   +
Sbjct: 546 LPSLVTQSRDGIDRVRKIVADLKDFSRLDASQDWQWADLHQGLDSTLNIVNNEIKYRAEV 605

Query: 305 EKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGEGTITITLQSAGDD---FVEIHIRD 361
            + Y   +P+V C P Q+NQV LN+LVN++HA+       ITL+S  D+    V + + D
Sbjct: 606 VREYG-QLPEVECLPSQLNQVFLNLLVNSAHAMPEGQMGRITLRSGHDEPAHQVWLEVED 664

Query: 362 TGCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVTSEVGKGSEFTIR 421
            G GI  E   R+F+PFFTTKPVG GTGLGLS+SYGI+ KH+G I+V+SE+GKG+ F I 
Sbjct: 665 NGSGISPENMHRLFDPFFTTKPVGKGTGLGLSLSYGIVQKHHGQITVSSELGKGTTFRIV 724

Query: 422 LPVNPSAE 429
           LPV+   E
Sbjct: 725 LPVSQPKE 732