Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  175 bits (444), Expect = 2e-48
 Identities = 126/434 (29%), Positives = 206/434 (47%), Gaps = 52/434 (11%)

Query: 1   MAKSRLLLSELLDQLSFALCIVRNDYVIVKVNEYFESRVIFDGETMQGKNILELFPESAD 60
           + +S   ++ +L  +S  L +      I +VN  F+     D  T++G +I +LF +   
Sbjct: 59  LEESHRFIASILASMSDILVVCDRHGAIEEVNPAFQRYTGRDEPTLKGTSIFDLFAD--- 115

Query: 61  YLKRKIDTALVIESSSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEH 120
                 D A     S F+S                        Q++E +P+ +EDG    
Sbjct: 116 ------DKARDKARSFFAS------------------HSHDGAQDVE-LPLQAEDGGAVP 150

Query: 121 VCLC----------VYDVTIQASQQQELKRVSQKLEEEHQSQKVLIKKLEDAQGQLIQSE 170
           V             +  + +      EL+R  ++L + H+        L+  Q QL+ SE
Sbjct: 151 VSFNWTPRLSGTGKLIGMVVTGRPVGELRRAYRELRQTHED-------LKRTQQQLLHSE 203

Query: 171 KMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTALNEAC 230
           KMAS+G+L AG+AHE+NNP+ F+  N+  L  Y   LE  L+++      ++        
Sbjct: 204 KMASLGRLVAGVAHELNNPISFVLGNVLALKRYAGRLETYLEAV-----HNRGCDCIPEL 258

Query: 231 QKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRSEWSYANLENCIEST 290
           +++  + ++D ILED + LI   +EG+ R   IV  LK FS +DR      NL   ++  
Sbjct: 259 EELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLKRFSALDREAAERFNLAEVVQRA 318

Query: 291 LKIINNEIKYNITLEKHYAANVPDVFCQPMQINQVLLNILVNASHAIKGE-GTITITLQS 349
           ++ +      + T+     A +P +   P Q+ QV++N++ NA  A   + G   +    
Sbjct: 319 VRWVAKSAPPSFTVRTELPAELP-LRGSPGQLQQVVMNLVQNALQATAAQPGGELLISGE 377

Query: 350 AGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSGTGLGLSVSYGIINKHNGTISVT 409
            GD  + +   D G GIP+E    +F+PFFTTKPVG GTGLGLS+SYGI+ +H G I  +
Sbjct: 378 LGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVGEGTGLGLSISYGIVERHGGRIVAS 437

Query: 410 SEVGKGSEFTIRLP 423
           +    G+ F + LP
Sbjct: 438 NHPEGGAVFRLTLP 451