Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 955 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  134 bits (337), Expect = 1e-35
 Identities = 85/284 (29%), Positives = 143/284 (50%), Gaps = 36/284 (12%)

Query: 166 LIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQSKDTA 225
           L+Q+EKM S+G L+ G+AHE+NNP+G +   +Q           +++ +   +  +   A
Sbjct: 689 LVQTEKMLSVGGLAGGMAHELNNPLGAVLQGVQN----------IIRRLDPDMAANAQAA 738

Query: 226 LNEACQKILKQGQVDFILEDTAELITESLEG----SSRVMSIVKNLKEFSHVDRSEWSYA 281
            +     +  +  ++      A  I+E LEG      R   I+  + EF+   +   + A
Sbjct: 739 RDAGVSLVAMRSYME------ARRISEMLEGIRDAGVRAADIIATMLEFTRPGQGRRTTA 792

Query: 282 NLENCIESTLKIINNEIKYN-------ITLEKHYAANVPDVFCQPMQINQVLLNILVNAS 334
                 E  L +  ++           + + + YA +   + C P +I QVLLN+  NA+
Sbjct: 793 RAHALAERALALAGSDYDLRRQYDFRKLHVVRDYAESADTLTCVPTEIEQVLLNLFKNAA 852

Query: 335 HAIKGEG-------TITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGSG 387
           HA+  +         + ++ +  GD+ V I + D G G+  E+R R+FEPFFTTKP G G
Sbjct: 853 HAMAEKDYPAGQTPALHVSTRREGDEVV-IVVEDNGPGMEPEVRRRVFEPFFTTKPPGVG 911

Query: 388 TGLGLSVSYGI-INKHNGTISVTSEVGKGSEFTIRLPVNPSAEA 430
           TGLGL+VSY I +  H G+I+     G+G+ FT+RLP   + ++
Sbjct: 912 TGLGLAVSYFIVVRTHGGSITCDGVPGEGARFTVRLPARQAVDS 955



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 25  DYVIVKVNEYFESRVIFDGETMQGKNILELFPESADYLKRK-IDT-ALVIESSSFSSWEQ 82
           DY  + VN  FE       E + G+ +LE+ P     ++RK +D    V+ +   +S+E 
Sbjct: 89  DYRFLDVNPAFEDMTGLSRERVLGRTLLEVLPG----IERKWVDIYGRVVSTGQSASFEH 144

Query: 83  KPHLL 87
           +  LL
Sbjct: 145 RDELL 149