Pairwise Alignments

Query, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  153 bits (386), Expect = 3e-41
 Identities = 99/293 (33%), Positives = 158/293 (53%), Gaps = 35/293 (11%)

Query: 156  IKKLEDAQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLS-----DYFNSLEKV 210
            I +++  Q  +IQ+EKM S+G ++AGIAHEINNP+G I      L+     D+  +L+  
Sbjct: 760  ITEMKRMQEVMIQTEKMISVGGIAAGIAHEINNPLGIILQAAHNLAQRTRPDFAKNLD-- 817

Query: 211  LKSITQTIGQSKDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEF 270
               +   +G   D     A ++ + Q ++D  +ED  +        + R  +I++++ +F
Sbjct: 818  ---VATRVGLDMD-----ALRQYMAQRKLDVFIEDIRD-------AAVRASAIIRHMLDF 862

Query: 271  SHVDRSEWSYANLENCIESTLKIINNEIKYN-------ITLEKHYAANVPDVFCQPMQIN 323
            S    S+    ++ + ++  + +  ++           IT+ + Y A +P V C P ++ 
Sbjct: 863  SRSGGSKRVPCDVTSILDKAVALAGSDYDLKKSYDFRRITITRDYEAGLPLVDCSPTELE 922

Query: 324  QVLLNILVNASHAIK-----GEGTITITLQSAGDDFVEIHIRDTGCGIPEEIRERIFEPF 378
            QVLLN+L NA+HA+      GEG          D+ V I ++D G GIP  ++ RIFEPF
Sbjct: 923  QVLLNLLRNAAHALAESHRDGEGPAIHLRVRRQDETVVIDVQDNGPGIPVALQRRIFEPF 982

Query: 379  FTTKPVGSGTGLGLSVSYGIINK-HNGTISVTSEVGKGSEFTIRLPVNPSAEA 430
            +TTKP G GTGLGLSVSY I+ K H G ++V +    G+ F I LP+  S EA
Sbjct: 983  YTTKPPGVGTGLGLSVSYFIVTKGHGGNLTVVTPPEGGTLFRIELPLQGSTEA 1035