Pairwise Alignments

Query, 194 a.a., chemotaxis protein CheC from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 2e-35
 Identities = 69/193 (35%), Positives = 116/193 (60%), Gaps = 4/193 (2%)

Query: 1   MSIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAAD 60
           M+++LS + +DALQE MNISMG+AA+ LA L+   +T+S+P I   T E   ++ S    
Sbjct: 1   MNMLLSEEQRDALQELMNISMGQAANSLARLIEAKITLSIPKISDVTPEQFVSMLS-DQT 59

Query: 61  YYYTRQSFYGGMDGELITLMSRCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGAS 120
            +YTRQSF G + GE+I+ +S+ GC+ +   +++   +      + E +L+++NIL+GA 
Sbjct: 60  MWYTRQSFLGSIKGEVISTLSKQGCDAIGKLMDYQPPLTQD--RLNELLLELANILAGAC 117

Query: 121 LKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEINFLVEKASFSAKTIICFADK 180
           L G  +Q+ L  K+  P ++  T Q     +W  +L+ME+ F VE + F +K +IC  + 
Sbjct: 118 LTGFAEQLSLNAKLSMPTMYSATSQHYH-YRWASTLMMEVEFKVEVSQFDSKIVICLEEA 176

Query: 181 ELDKVFAHLDELL 193
            +  + A L +LL
Sbjct: 177 SVQTLLAKLQQLL 189