Pairwise Alignments

Query, 194 a.a., chemotaxis protein CheC from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 4   VLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDM-RALQSYAADYY 62
           ++  D +DA QE  N++MGRAA  LA LL++ V + +PN+ V    ++  AL++      
Sbjct: 134 MIKVDMRDACQEIANVAMGRAADLLAKLLDVFVLLPIPNVNVLEVSELTMALKATEESST 193

Query: 63  YTR--QSFYG-GMDGELITLMSRCGCEQVVNDLNHSKGMA---DGLVSIEESILDISNIL 116
            +   Q F G G+ GE + L      +    D+    G+A   D    I E ++D  N+L
Sbjct: 194 VSALCQGFIGAGVAGEALLLFH----DSSFQDMAKLMGVANPEDKQTEI-EVLIDTGNVL 248

Query: 117 SGASLKGLCQQIELKTKIQPPVIF-------DPTHQPLPILQWRLSLIMEINFLVEKASF 169
            GA L G+ +Q+++K     PV+        D  H      +W  +L MEIN+ +E  + 
Sbjct: 249 IGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSE--KWHRTLAMEINYRIENHNI 306

Query: 170 SAKTIICFADKELDKVFAHLDELL 193
               ++ F +  +  +   L  LL
Sbjct: 307 QCDLLLLFTEDSIPTLSYKLGYLL 330