Pairwise Alignments

Query, 121 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 5   LTVADDSKMSRKSVIRAIPAGWDVEITEAQNGKEAVENYNNGLADVMFLDLTMPEMDGIQ 64
           L V DD+  + +S++R +  GW     EA +G+ AV        D + +D+ M  MDGI 
Sbjct: 7   LIVDDDA--AHRSMLRTMLRGWGYATEEADDGESAVAKVRQRAWDAVLMDVRMARMDGIA 64

Query: 65  VLEHFHRIDAKCLVIVISADIQPLVQQRVRELGALNFLQKPLDPAQLEQTLHEA 118
            L H    +    V++++A             GA ++L KPLD   L  TL  A
Sbjct: 65  ALRHILDWNPATPVLIMTAFSSVDTAVEALRTGAYDYLIKPLDFDVLRHTLERA 118