Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., HDOD domain. from Pseudomonas stutzeri RCH2

 Score = 52.4 bits (124), Expect = 3e-11
 Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 141 EIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNT-DSLH 199
           E+P L + V+ LQ++    + S+  +A+ ++ +  L +K++++ NSSY+   + T  ++ 
Sbjct: 27  ELPALASVVKDLQRLAVHEHASVQQLADVLLRDAALTSKVLRVGNSSYYNPSQETIKTIS 86

Query: 200 EAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCA--FKSSSIARALVRELGFPRQ 257
            A+  +G   V  I++S+  I  S +  A   Q +   A  F ++  AR +   +   R 
Sbjct: 87  RAIVMIGFENVRLISLSVTLID-SLLERAPREQLLELLARSFHAAVQARNIAGYV-LSRH 144

Query: 258 DQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCDVISAYI 306
           D++ +F+A LL +IG++     G  + + L     QPG    + + A +
Sbjct: 145 DEE-VFIAALLYNIGELAFWGCGGEQVDELAVQLAQPGVKADEAVQAVL 192