Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., putative signal transduction protein (RefSeq) from Shewanella loihica PV-4

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 52/263 (19%), Positives = 118/263 (44%), Gaps = 41/263 (15%)

Query: 140 EEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNTDSLH 199
           +E+P L ++V+ L+++      S+  +  +++H+  L ++I+++ANS+ +    N    H
Sbjct: 16  QEMPALSSTVKTLEKLAKDDVSSLAILGRSVMHDNALTSRILKVANSAIY----NKGISH 71

Query: 200 EAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVAD-----------CAFKSSSIARAL 248
                  AV++    I  + I    ++S  +++ +++            AF+++ +A+ +
Sbjct: 72  VTTVSRAAVVLGFDTIRNICITAKLLSSLLENKGLSEPVYHRLLTLMARAFQAAMLAKMM 131

Query: 249 VRELGFPRQDQDRIFVANLLTSIGKILLLEDGASKKEFLDYYHLQPGYADCD-------- 300
           +++     + Q+ +F+A LL  +G+      G    E LD    Q    D +        
Sbjct: 132 LKD--HDEELQEEVFIAALLYHLGESAFWSMGGETTEQLDARLNQVDEKDANNVVREVLG 189

Query: 301 ----VISAYILIMWGYDIDIGDIILNQRLTSFSGEHLEQLGSLSCLANRI-----ENCKQ 351
                +S  I   WG    +G++++  +  S   E   ++ S+  LAN+I      + K 
Sbjct: 190 TSFTQLSMGIAKNWG----LGEVLV--KSLSNPNERTPEIRSI-YLANKISELMASDSKD 242

Query: 352 INEYRQLVQEAPDSIQGALKELE 374
           I E    +++A D +   + E +
Sbjct: 243 IAELNHRIKQAADMLDLEVDEFK 265