Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 3   VEAMKVVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHWVVDV--EHAPSVVISDLLM 60
           V    ++ VDD+  +L AL R+ RR   +  + L  ++    +D+   H   V+ISD  M
Sbjct: 742 VPGRTLLLVDDEPGILSALKRLFRR---EGYVILTANSGKEGLDILAGHDVGVIISDARM 798

Query: 61  PGKNGEALLTELRARCPETMRVLLTGDT 88
           P  +G   L ++RA  P+TMR++L+G T
Sbjct: 799 PEMDGAEFLGKVRAMYPDTMRIILSGYT 826



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 8  VVCVDDDDFMLKALGRMIRRMRPDWEIELVEDANHW--VVDVEHAPSVVISDLLMPGKNG 65
          V+ VDD    L  +G ++    P + + +         V +    P +++ D++MP  +G
Sbjct: 19 VLVVDDTKENLTVIGELLN---PHYNVRIANSGQRALKVANSTPVPDLILLDIMMPEMDG 75

Query: 66 EALLTELRARCPETMRV 82
             L ELRA  P T  +
Sbjct: 76 YETLAELRAN-PATRHI 91