Pairwise Alignments

Query, 380 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 34/141 (24%), Positives = 71/141 (50%), Gaps = 3/141 (2%)

Query: 136 LGALEEIPILPNSVRKLQQVIASPNCSMDAIAETIVHEPVLVAKIIQIANSSYFGFRRNT 195
           L  ++E+P LP ++ +L +V+   N ++  IA  +  +P++ AK++++AN +Y+G  R  
Sbjct: 7   LSRVDELPRLPKAISELLEVVNDDNATVKNIATKVSRDPLISAKVLRLANCAYYGHSREV 66

Query: 196 DSLHEAVARLGAVLVESIAISLLAIHPSNVNSAEDHQWVADCAFKSSSIARALVRELGFP 255
            S+ EAV RLG   + ++ ++   +      +  D        F+ +  ++ + +  G  
Sbjct: 67  GSIDEAVVRLGMQTLRTLVLASAVMGAVPKCNGVDLAHFWGQTFEIALYSQEMAKRCGV- 125

Query: 256 RQDQDRIFVANLLTSIGKILL 276
               D  F   +L  IG +L+
Sbjct: 126 --QPDEAFTCGILHRIGDLLI 144