Pairwise Alignments

Query, 1088 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 868 a.a., glycosyl hydrolase family chitinase (RefSeq) from Shewanella sp. ANA-3

 Score =  122 bits (305), Expect = 2e-31
 Identities = 188/774 (24%), Positives = 288/774 (37%), Gaps = 186/774 (24%)

Query: 386  RIIG-YYTSWRTGKNGLPAYLAGDLPWEKLTHINYAFASI-------------------- 424
            +++G Y+  W       P      +P + LTHI Y F  I                    
Sbjct: 161  KVVGSYFVEWGVYGRKFPV---DKIPAQNLTHILYGFTPICGGNGINDSLKEIEGSFEAL 217

Query: 425  -----NKSDFSMQVDD--SATKMTWENVPGAEMDPSLPYQGHFNLLSKFKKQYPDVKTLI 477
                  ++DF + + D  +A +M    V     + S PY+G+F  L   K+ YPD+K L 
Sbjct: 218  QRACAGRADFKVAIHDPWAAVQMPQAGVS----EYSDPYKGNFGQLMALKQAYPDLKILP 273

Query: 478  SVGGWAETGGFYPMTTDLASCSVNMEGIKAFNKSAVDFIRQYDF-DGVDIDYEYPSSMKD 536
            SVGGW  +  FY +                F  S  +F++ + F DGVDID+E+P     
Sbjct: 274  SVGGWTLSDPFYFLGDKTKR--------DTFVASVKEFLQTWKFFDGVDIDWEFPGG--S 323

Query: 537  SGNPVDFEQSNKCRGQLWDNYMVMMTELRKALDKAGEEDGRRYMLTIASPSSAYLLRGMQ 596
              NP      N   GQ    Y+ +M ELR  LD+   E GR Y LT A  +    +  + 
Sbjct: 324  GANP---SLGNANDGQ---TYVTLMRELRAMLDELSAETGRSYELTSAISAGGDKIAKVD 377

Query: 597  DFAMQDVLDYVNIMSYDLHGTW-NEFVGPQAALFDDGKDAELAKWGVYTTAEYQGIGYLN 655
              A Q  +DY+ +MSYD +G W N  +G Q  L++       A W   T        Y  
Sbjct: 378  YQAAQQYMDYIFLMSYDFNGGWTNTELGHQTNLYE-------ASWDPNTR-------YTM 423

Query: 656  QAWTHHFFRGAFKPSQINMGIPYYTRGWQGVSG--GDKGLWGRAVEPNQSSCPEGTTVCG 713
                         P +I +G   Y RGW GV+G  G+    G A          G     
Sbjct: 424  DKGVKALLSQGVTPGKIVVGAAMYGRGWTGVNGYSGNNPFTGTAT---------GKVKGT 474

Query: 714  WGAEGTDNIWHDVDANGNEIKAGVVPMWHAMNLMHAEKLGIDGMPSYGPAWGMDPNNPKH 773
            W                   +AGVV            ++  D M   G  W         
Sbjct: 475  W-------------------EAGVVDY---------RQIAKDYM---GAGWSY------- 496

Query: 774  LIEGKYERVWSQELQTAWLWNDTKKVFLSIEDKDSLKPKLDYIVDNGLGGMMIWEMAGDY 833
                     + +  +   ++N +    ++ +D  S+K K  Y++ N LGG+  WE+  D 
Sbjct: 497  --------AYDETAEAPSVFNASTGDLITFDDARSVKAKGQYVLTNQLGGLFAWEIDAD- 547

Query: 834  SYDAVKREYVIGSDMTSYAHEVFAAAKPMDIRHNDLPQPDSVIDVTVSTT---EWPEGDS 890
                         D+ +  HE     +      N  P  ++  D+TV+ T         S
Sbjct: 548  -----------NGDILNAMHEGLGHGEGTMPPANKAPIANAGADITVTGTADVTLNGSAS 596

Query: 891  NYPINPKLVFTNHSNVAIPGGSTIEFLMPT-------SSGDIVKDWSGAGLKVIESGHTG 943
              P N  L +   S V+ P  S     M         ++ D+V  +S   L+V +     
Sbjct: 597  RDPENGALSY-QWSQVSGPSLSISNADMANAVVQLSEAASDVVYVFS---LQVTDPEGLS 652

Query: 944  SNFSVNGEKKLFHKV-------AVTLRSTETIPAGGEYSVD----------MVY-YTPVS 985
            S  +V     L HK         VT+ ++ T+ AG   S++          + Y +T  S
Sbjct: 653  STDTVT----LTHKAETANQAPVVTVPASVTVEAGQSVSINATATDADGDSLTYAWTVPS 708

Query: 986  GVA----NGVRFIVGNETVGLKKDFP-TLPAFEGATDGG-----NGNEGGAGQSCADAGI 1035
            GVA    N    +V   TV     +  ++   +GA D       +      G  C DA  
Sbjct: 709  GVAASGQNTATLVVTAPTVTQSTQYSLSVLVSDGALDASAALTLSVTPKATGGQC-DA-T 766

Query: 1036 NPNGLKVYPEFPRGDHAAGGDQLIHNGSVWQANWWT-NSTPSSADASWKAVCKI 1088
            +PN    YP +         D + +N  VW+A +WT  +TPS     W+ + ++
Sbjct: 767  DPNAAN-YPAWNATSIYNTDDTVSYNQLVWKAKYWTQGNTPSRTADQWQLLSQV 819



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 1054 GGDQLIHNGSVWQANWWTNSTPSSADASW 1082
            GG    +NG  WQA +WT        A W
Sbjct: 831  GGATTSYNGRQWQAKYWTKGDVPGVAAVW 859