Pairwise Alignments

Query, 411 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  573 bits (1478), Expect = e-168
 Identities = 284/400 (71%), Positives = 334/400 (83%)

Query: 1   MFMLSQLNAHVRQYMLVTFNYWNFTLTDGALRMLVVLYFYDLGYSSLAIASLFLFYEFFG 60
           M  L++L+  VRQY++VT NYW FTLTDGALRMLVVL+F+ LGYS L IA+LFLFYE FG
Sbjct: 1   MQALARLSPEVRQYLIVTGNYWAFTLTDGALRMLVVLHFHALGYSPLQIAALFLFYEVFG 60

Query: 61  VVTNLIGGWLGARLGLNRTMNIGLGLQIIALLMLAVPASWLTIPWVMAAQALSGIAKDLN 120
           V+TNL+GG+LGARLGLNRTMN+GL +Q++ALLML VPA+WLT+PWVM AQALSGIAKDLN
Sbjct: 61  VITNLVGGYLGARLGLNRTMNLGLAMQVVALLMLTVPAAWLTVPWVMGAQALSGIAKDLN 120

Query: 121 KMSAKSAIKTLVPENAQGALFKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAAMAA 180
           KMSAKS+IK LV ++ QG L+KWIAILTGSKNALKG GFFLGGALL+L+GF  AV  MAA
Sbjct: 121 KMSAKSSIKLLVSDSQQGTLYKWIAILTGSKNALKGVGFFLGGALLTLLGFAGAVLTMAA 180

Query: 181 VLVLVFIGSVMSLKSDLGKAKNKPKFSDIFSKSASVNILSAARLFLFGARDVWFVIALPI 240
           VL +++IGS++ LK DLGKAK KPKF DI SKS ++N+LSAARLFLFGARDVWFVIALP+
Sbjct: 181 VLAVIWIGSLVLLKKDLGKAKAKPKFKDILSKSPAINVLSAARLFLFGARDVWFVIALPV 240

Query: 241 YLGSVFGWDHSAVGGFLALWVIGYGVIQGFAPKITGSKSEHPPAGRAAIGWALALSLVTG 300
           YL +VFGWD   VGGFLA W+IGYG++Q  AP ITG +S   P GRAA  WA  L+ +  
Sbjct: 241 YLSTVFGWDFWKVGGFLACWIIGYGIVQSMAPAITGKRSGQVPDGRAAFIWAALLAALPA 300

Query: 301 LIAYGVQIQWHPEVVIIGGLMLFGAVFAVNSSLHSYLIVSYAKDDGVSLDVGFYYMANAM 360
            IA G+     P+ V+IGGL+LFG +FAVNSSLHSYLIVSYAK+DGVSLDVGFYYM+NAM
Sbjct: 301 AIAAGLATGASPQWVLIGGLLLFGGLFAVNSSLHSYLIVSYAKEDGVSLDVGFYYMSNAM 360

Query: 361 GRLIGTILSGWVFQLWGLAACLWVSFGFLVLTTLISFWLP 400
           GRLIGT+LSGWVFQ +GL ACLWVS  F++L  LIS  LP
Sbjct: 361 GRLIGTLLSGWVFQAYGLQACLWVSSLFVLLAALISLRLP 400