Pairwise Alignments

Query, 411 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., putative membrane transporter from Synechococcus elongatus PCC 7942

 Score =  422 bits (1085), Expect = e-123
 Identities = 220/399 (55%), Positives = 281/399 (70%), Gaps = 10/399 (2%)

Query: 11  VRQYMLVTFNYWNFTLTDGALRMLVVLYFYDLGYSSLAIASLFLFYEFFGVVTNLIGGWL 70
           +R+Y LVT  YW FT+TDGALR+LV+LYF  +GYS LAIASLFL YE FG+VTN +GGW+
Sbjct: 10  LRRYALVTLAYWGFTITDGALRLLVLLYFNQIGYSPLAIASLFLLYEIFGIVTNFLGGWI 69

Query: 71  GARLGLNRTMNIGLGLQIIALLMLAVP----ASWLTIPWVMAAQALSGIAKDLNKMSAKS 126
           GAR GL  T+  G+ LQI ALL+L+        W  I WVMAAQALSGIAKDL KMSAKS
Sbjct: 70  GARFGLKLTLYGGVTLQIAALLLLSGLNRDWPMWGAIAWVMAAQALSGIAKDLTKMSAKS 129

Query: 127 AIKTLVPENAQGALFKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAAMAAVLVLVF 186
           AI+ +VP  A+G LFKW+A+LTGSKNALKG GFF+G  LL+ +G+Q A+  +A  L LV 
Sbjct: 130 AIRLVVPRQAEGRLFKWVAVLTGSKNALKGVGFFIGSWLLASLGYQGALHFLALGLSLVL 189

Query: 187 IGSVMSLKSDLGKAKNKPKFSDIFSKSASVNILSAARLFLFGARDVWFVIALPIYLGSV- 245
           I S   + ++LG+ K KPKF  +FSKS  +NILSAAR FLFGARD+WFV+ALP++L +  
Sbjct: 190 ISS-FGVPANLGQLKRKPKFKQLFSKSQGINILSAARFFLFGARDIWFVVALPVFLRTEP 248

Query: 246 ---FGWDHSAVGGFLALWVIGYGVIQGFAPK-ITGSKSEHPPAGRAAIGWALALSLVTGL 301
               GW  +  GGFLALWVIGYG+IQ  AP  +   ++  PP+ +    W   L++    
Sbjct: 249 PLGLGWSFTQTGGFLALWVIGYGLIQTSAPPLLRWLEAGRPPSPQTVQRWGSGLAIAPAG 308

Query: 302 IAYGVQIQWHPEVVIIGGLMLFGAVFAVNSSLHSYLIVSYAKDDGVSLDVGFYYMANAMG 361
           +A  +Q  W    V+I GL LFG +FAVNS++HSYL+++Y+ DD V+LDVGFYYMAN+ G
Sbjct: 309 MAIALQSGWAAGPVVIVGLALFGLLFAVNSAVHSYLVLAYSADDQVALDVGFYYMANSAG 368

Query: 362 RLIGTILSGWVFQLWGLAACLWVSFGFLVLTTLISFWLP 400
           RL GT+LSG +FQ  GL  CLW S   + +   I+  LP
Sbjct: 369 RLAGTVLSGAIFQWLGLTGCLWGSALMVTVAAAIALALP 407