Pairwise Alignments

Query, 411 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., major facilitator transporter (RefSeq) from Shewanella loihica PV-4

 Score =  561 bits (1445), Expect = e-164
 Identities = 281/405 (69%), Positives = 333/405 (82%), Gaps = 6/405 (1%)

Query: 4   LSQLNAHVRQYMLVTFNYWNFTLTDGALRMLVVLYFYDLGYSSLAIASLFLFYEFFGVVT 63
           L  L + +RQY+LVT NYW FTLTDGALRMLVVL+F+ LGYS L+IA LFLFYE FGVVT
Sbjct: 6   LRALPSEMRQYLLVTGNYWAFTLTDGALRMLVVLHFHQLGYSPLSIAMLFLFYEIFGVVT 65

Query: 64  NLIGGWLGARLGLNRTMNIGLGLQIIALLMLAVPASWLTIPWVMAAQALSGIAKDLNKMS 123
           NL+GG+LGARLGLNRTMNIGLGLQ+ AL ML VP+SWL +PWVMAAQALSGIAKDLNKMS
Sbjct: 66  NLVGGYLGARLGLNRTMNIGLGLQVAALAMLLVPSSWLVVPWVMAAQALSGIAKDLNKMS 125

Query: 124 AKSAIKTLVPENAQGALFKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAAMAAVLV 183
           AKS++K LV +  +  L+K+IA+LTGSKNALKGAGFFLGGALL+L+GF+ A+  MAA+L 
Sbjct: 126 AKSSVKMLVAKGEEDRLYKYIAVLTGSKNALKGAGFFLGGALLALLGFKGAIGLMAALLA 185

Query: 184 LVFIGSVMSLKSDLGKAKNKPKFSDIFSKSASVNILSAARLFLFGARDVWFVIALPIYLG 243
           +V++ S++ LK DLGKAKNKPKF+++FSKS ++NILSAAR+ LF ARDVWFV+ALP+YL 
Sbjct: 186 IVWLVSIIKLKQDLGKAKNKPKFTELFSKSRAINILSAARMCLFAARDVWFVVALPVYLA 245

Query: 244 SVFGWDHSAVGGFLALWVIGYGVIQGFAPKITGSKSEHPPAGRAAIGWALALSLVTGLIA 303
           S FGWDH  VGGFLALW+IGYG +Q  AP++TG  S   P GR+A+ WA AL+++  LIA
Sbjct: 246 SQFGWDHYQVGGFLALWIIGYGAVQSLAPRVTGKASGQVPDGRSAMWWASALTIIPALIA 305

Query: 304 Y---GVQIQWHPEV---VIIGGLMLFGAVFAVNSSLHSYLIVSYAKDDGVSLDVGFYYMA 357
           Y   G      P     V++ GLMLFGAVFAVNSSLHSYLIVSYA DDGVSLDVGFYYMA
Sbjct: 306 YLMSGELAALAPGFNLGVLLLGLMLFGAVFAVNSSLHSYLIVSYASDDGVSLDVGFYYMA 365

Query: 358 NAMGRLIGTILSGWVFQLWGLAACLWVSFGFLVLTTLISFWLPNR 402
           NAMGRL+GTILSGWV+Q +GL ACLW+S G L LT +IS  LP R
Sbjct: 366 NAMGRLLGTILSGWVYQAYGLGACLWISTGLLGLTVVISVGLPRR 410