Pairwise Alignments

Query, 411 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  559 bits (1441), Expect = e-164
 Identities = 281/410 (68%), Positives = 336/410 (81%), Gaps = 11/410 (2%)

Query: 4   LSQLNAHVRQYMLVTFNYWNFTLTDGALRMLVVLYFYDLGYSSLAIASLFLFYEFFGVVT 63
           L QL A VRQY+L+TFNYW+FTLTDGALRMLVVL+F+DLGY+  AIA LFLFYE FGVVT
Sbjct: 10  LMQLPAAVRQYLLITFNYWSFTLTDGALRMLVVLHFHDLGYTPFAIAMLFLFYEIFGVVT 69

Query: 64  NLIGGWLGARLGLNRTMNIGLGLQIIALLMLAVPAS----WLT-IPWVMAAQALSGIAKD 118
           NL+GG+LGARLGLNRTMN+GLG+Q++AL ML VPA+    WL  +PWVMAAQALSGIAKD
Sbjct: 70  NLVGGYLGARLGLNRTMNLGLGMQVLALGMLLVPAASLPLWLAGVPWVMAAQALSGIAKD 129

Query: 119 LNKMSAKSAIKTLVPENAQGALFKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAAM 178
           LNKMSAKSAIK LVP+  QG L+ W+A+LTGSKNALKGAGFFLGGALL+ +GF  A+AAM
Sbjct: 130 LNKMSAKSAIKLLVPKGEQGRLYHWVALLTGSKNALKGAGFFLGGALLAGLGFNMAIAAM 189

Query: 179 AAVLVLVFIGSVMSLKSDLGKAKNKPKFSDIFSKSASVNILSAARLFLFGARDVWFVIAL 238
            AVL LV++ S++ LK DLGKAKNKPKF++IFSKS SVNILSAARLFLF ARDVWFV+AL
Sbjct: 190 MAVLALVWLMSLVLLKKDLGKAKNKPKFTEIFSKSRSVNILSAARLFLFAARDVWFVVAL 249

Query: 239 PIYLGSVFGWDHSAVGGFLALWVIGYGVIQGFAPKITGSK------SEHPPAGRAAIGWA 292
           P+YL S + WDH AVGGFLALWVI YG++Q  APKITG+       S+  P G  A+ W+
Sbjct: 250 PVYLASQWDWDHWAVGGFLALWVIAYGIVQTLAPKITGASRAEANTSQRIPDGYTALVWS 309

Query: 293 LALSLVTGLIAYGVQIQWHPEVVIIGGLMLFGAVFAVNSSLHSYLIVSYAKDDGVSLDVG 352
             L+ V  LIA  + + + P++ +I GLMLFG +FA+NSSLHSYLIVSYA ++ VSLDVG
Sbjct: 310 TLLAFVPALIALSLYLDFSPQLSLILGLMLFGGLFAINSSLHSYLIVSYASEEAVSLDVG 369

Query: 353 FYYMANAMGRLIGTILSGWVFQLWGLAACLWVSFGFLVLTTLISFWLPNR 402
           FYYMANAMGRL+GT+LSGWV+Q +GL ACLW+S  F+ +T LIS  LP +
Sbjct: 370 FYYMANAMGRLVGTVLSGWVYQSYGLVACLWISTAFIAITALISIKLPRQ 419