Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 80.1 bits (196), Expect = 4e-19
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 15/155 (9%)

Query: 532 ISHTDNLTKLRNRRALYNRYRRGLSPR----LSLVYLDVNTFKSINDQYGHEVGDKVLKQ 587
           +S  D LT L NR  L++  R  L       L+L+ LD++ FK +ND  GH VGDKVLK+
Sbjct: 435 LSLHDPLTGLANRNRLFDCLREHLDRADRRPLALLNLDMDRFKPVNDSLGHAVGDKVLKE 494

Query: 588 LAQRIEAVWRGRSY--RIGGDEFILI------GECSAKRLEHVVAQCERFMFVDAERDVS 639
           +A  ++   RG     R+GGDEF+++       +   +  E ++   +R M +D     +
Sbjct: 495 VAHILQQNVRGTDLVARLGGDEFVIVMPDPGDADDLDQLCERLIDCMQRPMHLDGN---T 551

Query: 640 FEVSVAIGIAKNRERTESLNEVMHQADIAMYRAKA 674
             + V+IG+A ++   E  +E++  ADIA+Y AKA
Sbjct: 552 LYLGVSIGVAWSQPGDERADELLRHADIALYAAKA 586