Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 93/416 (22%), Positives = 178/416 (42%), Gaps = 54/416 (12%)

Query: 288 GSVRGISADVVFQACEMLLLKCELVSNGQETWESMFDDLQDKSIDILAPITVSQQRKNLA 347
           G   GI+AD++    E   L  ++V      W++     +     +L+ +  + +R    
Sbjct: 59  GEHEGIAADLLRLVAERAGLPLQIVPT--RDWDASVAASKAGRCQLLSFLNQTPERDAWL 116

Query: 348 YFSESYYHPQAILVKREHYKDDVYSNVSELVAERIGVIKDDFFEELLQQMLPNKILFSYA 407
            F+   +    +L+ R+ +   V  N+S L    + +      EE ++   P   +    
Sbjct: 117 IFTRPLFTDANVLIARDEHPHVV--NLSALTGASVALPSGTSVEEHIRHDFPQLRIIRSE 174

Query: 408 SQEEKVQALLNKEVDYIVLNRANFNLLLRESTEMLPIVEDTMIGSFYQYDIAIGFAKNPL 467
           +  + +  +   + D  + +       +R    +   +   + G   Q+ I +     PL
Sbjct: 175 TDAQALMMVSEGKADLTIRSLTVAAYTIRHDGWLNLKIAGQVSGFDNQFRIGV-LNSEPL 233

Query: 468 GATLAPLFSRAIKMLNTEQIIHTYDYQPNWRATLLAEKKYQRSTQWLFAMAFIVLFMVA- 526
              L  +  +AI  +   ++        N  A      + + +T +   +  +V+F V  
Sbjct: 234 ---LRDILDKAIATVTPVEL--------NQIANRHVPIRVETATDYRLVVQMVVVFSVVL 282

Query: 527 ----FYLHGI----------SHTDNLTKLRNRRALYNRYRRGLSPR------LSLVYLDV 566
               F++  +          S TD+LT L NR AL  R+   L         LS+V LD+
Sbjct: 283 LTSLFWIGRLRRLNEQLQIKSQTDSLTGLANRSALDGRFAVALEQARRYHRPLSIVMLDI 342

Query: 567 NTFKSINDQYGHEVGDKVLKQLAQRIEAVWRGRSY--RIGGDEFILI-----GECSAKRL 619
           + FK IND++GH++GD+VL+++A  +++  RG     R GG+EF+++     G  +    
Sbjct: 343 DHFKRINDEFGHQMGDRVLREIAGLLQSCLRGTDAVGRWGGEEFLVLCPETNGLQAEVFA 402

Query: 620 EHVVAQCERFMFVDAERDVSFEVSVAIGIAK--NRERTESLNEVMHQADIAMYRAK 673
           E +  Q   F F   +R      S++ G+A+    + T+SL   + +AD A+YRAK
Sbjct: 403 ERICEQVRAFPFSTGQRQ-----SLSAGVAELIPADTTDSL---LRRADAALYRAK 450