Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 78.2 bits (191), Expect = 1e-18
 Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 15/151 (9%)

Query: 536 DNLTKLRNRRALYNRYRRGLSPR------LSLVYLDVNTFKSINDQYGHEVGDKVLKQLA 589
           D LT L NR  L +R  +GL+        L+LV++D++ FK IND  GH  GD++LK +A
Sbjct: 352 DLLTGLPNRILLNDRIEQGLARAARLGYYLTLVFIDLDNFKFINDGLGHVAGDELLKSIA 411

Query: 590 QRIEAVWRGRS--YRIGGDEFILIGECSAKRLEHVVAQCERFMFVDAERDVS-----FEV 642
            R+    RG     R+GGDEF+L+      R+  V++  ER +  +  R V+     F+V
Sbjct: 412 ARLAGSLRGSDTVARVGGDEFVLV-LSDHYRISTVISLLER-VLNEIRRPVTLAGREFQV 469

Query: 643 SVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
             +IG+A      E    ++  ADIAMY AK
Sbjct: 470 GASIGVAMFPGDGEDAQTLLKHADIAMYAAK 500