Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 17/164 (10%)

Query: 529 LHGISHTDNLTKLRNRRALYNRYRRGLSP------RLSLVYLDVNTFKSINDQYGHEVGD 582
           LH ++  D LT L NR    +R    L+       R++L+Y+D++ FK IND YGH  GD
Sbjct: 280 LHRMAQYDELTGLPNRACFRDRLSTALARVRRNGGRIALLYVDLDRFKQINDTYGHGGGD 339

Query: 583 KVLKQLAQRIEAVWRGRS--YRIGGDEFILIGECSA------KRLEHVVAQCERFMFVDA 634
           ++L+ +A R+ A  R      R+GGDEF+++ E  A      + +E V +  E+ + +  
Sbjct: 340 QLLRAVADRLTACVRDTDTVARLGGDEFVVLLESIAEPEDAQRVVEKVRSAFEQPLSITG 399

Query: 635 ERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAKAESTQ 678
               S E+ ++IGIA   E  E+  +++ QAD  MY  KA   Q
Sbjct: 400 H---SLEIGMSIGIALYPEDGETETQLLKQADDRMYLMKARGGQ 440