Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 79.3 bits (194), Expect = 5e-19
 Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 25/211 (11%)

Query: 485 EQIIHTYDYQPNWRATLLAEKKYQRSTQWLFAMAFIVLFMVAF-------YLHGISHTDN 537
           +Q++     + N    L   K  Q +   L  +  I+L +VA+        L  ++ TD+
Sbjct: 434 QQLLELQKIKENELVILKQNKYLQLAVIVLGCIIMIILSIVAYKQSQKSKLLSILALTDH 493

Query: 538 LTKLRNRRALYNRYR-------RGLSPRLSLVYLDVNTFKSINDQYGHEVGDKVLKQLAQ 590
           LT+L NRR  Y++          G  P LS++  D + FK +ND+YGH++GDKVL  LA 
Sbjct: 494 LTQLPNRRYTYSKGEGYFKSKDEGHQP-LSIILFDADHFKKVNDKYGHDIGDKVLIALAN 552

Query: 591 RIEAVWRGRSY--RIGGDEFILI-----GECSAKRLEHVVAQCERFMFVDAERDVSFEVS 643
               + R +    R+GG+EF++I      E +    + +V   E   F D    ++F+++
Sbjct: 553 ISNGLMRKQDLVGRVGGEEFLVILPGTTAEQALNVAQRLVTTVESSNFDDVY--MNFKLT 610

Query: 644 VAIGIAKNRERTESLNEVMHQADIAMYRAKA 674
           ++ GIA   +  +S   ++ +AD A+YRAK+
Sbjct: 611 ISAGIACT-DGDKSFEHLLKRADDALYRAKS 640