Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 8e-18
 Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 34/180 (18%)

Query: 529 LHGISHTDNLTKLRNRRAL-------YNRYRRGLSPR------------LSLVYLDVNTF 569
           L  +SH D LT L+NRR +        NR  R                 L  + +D++ F
Sbjct: 174 LQEMSHRDPLTGLKNRRFIEEMIAQDLNRVDRSYDATQLRGEGTPSKADLLALIIDIDHF 233

Query: 570 KSINDQYGHEVGDKVLKQLAQRIEAVWRGRSY--RIGGDEFILIGEC--------SAKRL 619
           K IND YGH  GD+VL Q+ QR+  ++R   Y  R GG+EF+++            A+++
Sbjct: 234 KPINDTYGHLAGDRVLSQVGQRLTTLFRNYDYVVRWGGEEFLVVARFIDRQEINHLAEKV 293

Query: 620 EHVVAQCERFMFVDAERDVSFEVSVAIG---IAKNRERTESLNEVMHQADIAMYRAKAES 676
            H +   E  + +DA+R++    SV       +  +    S  +V+H AD+A+Y+AK  S
Sbjct: 294 RHAIESME--IELDAKRNIKITASVGAAPYPFSTAQADRISWEQVVHLADMALYQAKTSS 351