Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 529 LHGISHTDNLTKLRNRRALYNRYRRGLSP------RLSLVYLDVNTFKSINDQYGHEVGD 582
           L  ++H D LT L NR  L  R    +        RL L+++D+N FK+IND  GH+VGD
Sbjct: 266 LEKMAHQDPLTGLPNRLQLELRLSEAIREASQSGGRLGLIFIDLNQFKAINDSLGHQVGD 325

Query: 583 KVLKQLAQRIEAVWRGRSY--RIGGDEFI-LIGECSAKR-LEHVVAQCERFM---FVDAE 635
           +VL   A R++++        RIGGDEF+ L+ +  A R LE  VA+    +   F +  
Sbjct: 326 RVLMTAATRLQSLKGSEDLVARIGGDEFVMLLPQWPADRPLEEEVARLAEALFERFAEPV 385

Query: 636 RDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
                 ++ +IG A   +    ++ ++H AD AMY AK
Sbjct: 386 IQTGRGIAASIGFAIYPDHAGHMDALLHVADQAMYIAK 423