Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., diguanylate cyclase with extracellular sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 81.3 bits (199), Expect = 1e-19
 Identities = 101/419 (24%), Positives = 177/419 (42%), Gaps = 68/419 (16%)

Query: 292 GISADVVFQACEMLLLKCELVSNGQETWESMFDDLQDKSIDILAPITVSQQRKNLAYFSE 351
           GI+AD++    +   L  ELV     +W+      ++    +L+ +  + QR+    F++
Sbjct: 77  GIAADIIALVAQRTGLTFELVPTA--SWDESIAAAREGRCQVLSFLNQTPQREAWLGFTD 134

Query: 352 SYY-HPQAILVKREHYKDDVYSNVSELVAERIGVIKDDFFEELLQQMLPNKILFSYASQE 410
                P   + + EH       + + L    I   +    EEL+++  PN  +    S+ 
Sbjct: 135 PLLTDPNVFITRTEH---PAIIDPAALEGATIVFPRGTAMEELVRKDYPNLKVLVTESEA 191

Query: 411 EKVQALLNKEVD----------YIVLNRANFNLLLRESTEMLPIVEDTMIGSFYQYDIAI 460
           E ++ +  ++ D          Y +  +  FNL +      LP  E+ +     ++D   
Sbjct: 192 EAIRMVEERKADMTMRSLIVAAYTIRQQGLFNLKIAGK---LPEYENKLRMGVVRHD--- 245

Query: 461 GFAKNPLGATLAPLFSRAIKMLNTEQIIHTYDYQPNWRATLLAEKKYQRSTQWLFAMA-- 518
                PL  T+     R++ +   +QI+       N    + A+     +  WL A    
Sbjct: 246 -----PLLRTVLNRGIRSLTLEERQQIV-------NRHVPITAQTS---ADYWLVARVAG 290

Query: 519 -FIVLFMVAFY-----------LHGISHTDNLTKLRNRRALYNRYRRGLSPR------LS 560
            F +L  V  +           L  ++ TD LT L NR  L   +RR +          S
Sbjct: 291 FFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFS 350

Query: 561 LVYLDVNTFKSINDQYGHEVGDKVLKQLAQRIEAVWRGRSY--RIGGDEFILIGECSAKR 618
           +V LD++ FK +ND+ GH  GD+ L+  A  +    RG     R GG+EF+++  C    
Sbjct: 351 IVILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVL--CPETT 408

Query: 619 LEHVVAQCERFMFVDAERDVSFE----VSVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
            E  V   ER     + R   FE     +++ G+A  RE  +S++ ++H+AD A+YRAK
Sbjct: 409 AEEAVQLAERLR--GSLRATQFEGGRIHTLSAGVAAFRE-GDSVDTLLHRADTALYRAK 464



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 69  IAHHFNLEIEYVNYPSFNDILVAIETGNADFAANITYTDLRAQRFDFSRP---------T 119
           +A    L  E V   S+++ + A   G     + +  T  R     F+ P         T
Sbjct: 86  VAQRTGLTFELVPTASWDESIAAAREGRCQVLSFLNQTPQREAWLGFTDPLLTDPNVFIT 145

Query: 120 NIEYTYLYSYGGLRLPELRLVGIPKGTTYGTLLKEHYPYIQQVEYEGHLEALTLLESGRV 179
             E+  +     L   E   +  P+GT    L+++ YP ++ +  E   EA+ ++E  + 
Sbjct: 146 RTEHPAIIDPAAL---EGATIVFPRGTAMEELVRKDYPNLKVLVTESEAEAIRMVEERKA 202

Query: 180 D 180
           D
Sbjct: 203 D 203