Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 6e-19
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 18/177 (10%)

Query: 533 SHTDNLTKLRNRRALYNRYRR-----GLSPRLSLVYLDVNTFKSINDQYGHEVGDKVLKQ 587
           ++ D+LT L NR AL+ + +       L+P  S + +D++ FK +ND YGH+ GD +L Q
Sbjct: 315 ANNDSLTGLANRNALFRQIQELINADSLTPGFSFMLMDLDNFKQVNDTYGHDKGDVLLVQ 374

Query: 588 LAQRIEAVWRGRSY--RIGGDEF--ILIGECSAKRLEHVVAQCERFMF--VDAERDVSFE 641
           + ++++     ++   R+GGDEF  +L G  + + L  +  +  + ++   +   D    
Sbjct: 375 MVEQVKICLDPQAVFARLGGDEFAILLPGVVTQRELSQLADKINKQVYRRYELSHDKGVY 434

Query: 642 VSVAIGIAKNRERTESLNEVMHQADIAMYRAKAES-------TQSPFQAASKVKGLH 691
            SV+IGIA+  E    L ++++ AD AMY +KA         T+   Q A ++  LH
Sbjct: 435 SSVSIGIARFPEDALDLEQLLNCADQAMYISKANGRNRYHFFTEQMQQNAERIANLH 491