Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 72.8 bits (177), Expect = 5e-17
 Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 14/151 (9%)

Query: 536 DNLTKLRNRRALYNRYRRGL-------SPRLSLVYLDVNTFKSINDQYGHEVGDKVLKQL 588
           D LT L NR  L       L       S   +L++LD+N FK+IND +GH +GD+VL+ +
Sbjct: 281 DTLTGLPNRYHLKQILNSALDKLKDDPSALGALMFLDLNGFKNINDSFGHSMGDRVLQLV 340

Query: 589 AQRIEA--VWRGRSYRIGGDEFILI-GECSAKRLEHVVAQCERFMFVDAERDV---SFEV 642
           A R+EA  + +    R+GGDEF L+  ECS K    + A+    +F D+  ++    F +
Sbjct: 341 AARLEAGCIEKADIARMGGDEFTLVLQECSCKEEIQLFAEQILSLF-DSPFEIEGQKFFL 399

Query: 643 SVAIGIAKNRERTESLNEVMHQADIAMYRAK 673
             +IGIA     ++   +++  AD AMY AK
Sbjct: 400 GTSIGIALFPTHSDQAGQLISLADTAMYSAK 430