Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 75.1 bits (183), Expect = 2e-17
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 17/160 (10%)

Query: 529  LHGISHTDNLTKLRNRRALYNRYRRGLSPR------LSLVYLDVNTFKSINDQYGHEVGD 582
            L  ++  D LT L NR    +R    +S        ++L++LD++ FK IND  GH +GD
Sbjct: 1075 LRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGD 1134

Query: 583  KVLKQLAQRIE-AVWRGRSY-RIGGDEFILIGECSAKR------LEHVVAQCERFMFVDA 634
             +LK +A R++ AV  G +  R+GGDEF +I E  AK        E V+   +    +D 
Sbjct: 1135 LLLKAVAHRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAFQAPFLLD- 1193

Query: 635  ERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRAKA 674
              D S  +S +IGI+      E ++ ++  AD AMY AKA
Sbjct: 1194 --DKSLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAKA 1231