Pairwise Alignments

Query, 693 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 80.9 bits (198), Expect = 2e-19
 Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 18/177 (10%)

Query: 533 SHTDNLTKLRNRRALYNRYRR-----GLSPRLSLVYLDVNTFKSINDQYGHEVGDKVLKQ 587
           ++ D LT L NR AL+ + +       L+P  S + +D++ FK +ND YGH+ GD +L Q
Sbjct: 315 ANNDPLTGLANRNALFRQIQELISADSLTPGFSFMLMDLDNFKQVNDTYGHDKGDALLVQ 374

Query: 588 LAQRIEAVWRGRSY--RIGGDEFILI--GECSAKRLEHVVAQCERFMF--VDAERDVSFE 641
           + ++I+     ++   R+GGDEF L+  G  + + L  +  +  + ++   +   D    
Sbjct: 375 VVEQIKTCLNEQAVFARLGGDEFALLLPGLVTQRELSQLADKINKRVYQRYELSHDKGVY 434

Query: 642 VSVAIGIAKNRERTESLNEVMHQADIAMYRAKAES-------TQSPFQAASKVKGLH 691
            SV+IGIA+  E    L ++++ AD AMY +KA+        T+   Q A ++  LH
Sbjct: 435 SSVSIGIARFPEDALDLEQLLNCADQAMYISKADGRNRYHFFTEQMQQNAERIANLH 491