Pairwise Alignments

Query, 355 a.a., cysteine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., cysteine synthase B (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 37/306 (12%)

Query: 25  THLIKLD-LPCVSGVDIYLKDESTHPTGSLKHRLARSLFLYGLCNGWIGPETTIIESSSG 83
           T L++L  L C S   + LK E  +P GS+K R A ++         I P  T+IE++SG
Sbjct: 10  TPLVRLQRLDCGSST-VLLKLEGNNPAGSVKDRAALNMINQAELRQEIAPGDTLIEATSG 68

Query: 84  STAVSEAYFARLLGLPFIAVMPKCTARKKIEQIQFYGGKAHLVDRSDQIYAESHRLAKEL 143
           +T ++ A  A + G   I +MP  + +++ + +Q YG +  LVD  +     +  L  E 
Sbjct: 69  NTGIALAMAAAIKGYKMILIMPSNSTQERKDAMQAYGAELLLVDNMEAARDLALALQAEG 128

Query: 144 KGHYMDQFTYAERATDWRGNSNIADSIFSQMQMEQHPVPSWIVMSPGTGGTSATIGRFIR 203
           KG  +DQF   + A     N++   +     Q  Q  + +  V S GT GT   + ++++
Sbjct: 129 KGKVLDQFNNQDNA-----NAHFLTTGPEIWQQSQGKI-THFVSSMGTTGTIMGVSKYLK 182

Query: 204 YQQYNTKLCVVDPENSVFYDYYRTRNAELTRDCGSKIEGIGRPRVEPSFIPDV-----VD 258
            +  +  +  + P +                  GS I GI R   E  ++P +     VD
Sbjct: 183 SRNPDITIVGLQPAD------------------GSSIPGIRRWPQE--YLPGIFDAARVD 222

Query: 259 EMRAIPDAASVATIYWLEKILGRKAGASTGTNLYGALQLACEMKRRGEQGSIVTLLCDSG 318
            M  I +  + A    + + L R+ G   G +  GA+  A E+ R+     +V ++CD G
Sbjct: 223 LMMDIEEQDAKA----MARALAREEGICAGVSSGGAVYAALELARQYPGSVVVAIVCDRG 278

Query: 319 ERYLDT 324
           +RYL +
Sbjct: 279 DRYLSS 284