Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Periplasmic serine proteases (ClpP class) from Pseudomonas fluorescens FW300-N2E2

 Score = 67.0 bits (162), Expect = 7e-16
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 8/204 (3%)

Query: 109 VLDFHGSIDAKEVASLREEVSAILAVAQAGDE--VLLRLETGGGMVHGYGLASSQLDRLK 166
           +++  G I  KE AS    V ++ A  +      V+LR+ + GG     G    ++ RL+
Sbjct: 79  LINIEGMIADKEPASADNIVGSLRAAFEDPKVKGVVLRINSPGGSPVQSGYVYDEIVRLR 138

Query: 167 AAGLPLTI--AVDKVAASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIE 224
           A      +   +  + ASG Y +A  AD+I +   ++VGSIGV A    F   + K  +E
Sbjct: 139 ALHPDTKVYAVISDLGASGAYYIASAADQIYADKASLVGSIGVTATGYGFVGTMDKLGVE 198

Query: 225 FEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIREHRPALDLDK----VAT 280
               T+GE+K  L  F     +    ++  L+ TH+ F   +++ R     DK    + +
Sbjct: 199 RRVYTSGEHKSFLDPFQPQKPEETAFWQGVLDTTHKQFIASVKKGRGERLKDKEHPELFS 258

Query: 281 GEHWFGTQAKALGLVDEIQTSDDL 304
           G  W G QA  LGL+D + ++  +
Sbjct: 259 GLVWSGEQALPLGLIDGLGSASSV 282