Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Periplasmic serine proteases (ClpP class) from Pseudomonas stutzeri RCH2

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 16/216 (7%)

Query: 93  AAKEGELESKRDPHLFVLDFHGSIDAKEVASLREEVSAILAVAQAGDE--VLLRLETGGG 150
           A + G+ +  ++ H  V++  G I  +E AS    V A+ A  +  +   V+LR+ + GG
Sbjct: 61  ALQFGKSKGAQESHTAVINVRGMIADEESASADNIVGALRAAFENANTKGVVLRINSPGG 120

Query: 151 MVHGYGLASSQLDRLKAA--GLPLTIAVDKVAASGGYMMACIADKIVSAPFAIVGSIGVV 208
                G    ++ RL+     + +   +  + ASG Y +A  AD+I +   ++VGSIGV 
Sbjct: 121 SPVQSGYIYDEIRRLRGEYPAIKVYAVITDLGASGAYYIASAADEIYADKSSLVGSIGVT 180

Query: 209 AQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETHQLFKDFIRE 268
           A    F   + K  +E    TAGE+K  L  F     +  + ++  L  THQ F + ++ 
Sbjct: 181 AATFGFVDTMAKLGVERRVYTAGEHKAFLDPFQPEKPEESQFWRGVLATTHQQFIEAVKR 240

Query: 269 HRPALDLDKVATGEH--------WFGTQAKALGLVD 296
            R     D++   +H        W G QA  LGL+D
Sbjct: 241 GRG----DRLQDAQHPELFSGLVWSGEQALELGLID 272