Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., putative periplasmic protease (RefSeq) from Shewanella loihica PV-4

 Score =  393 bits (1010), Expect = e-114
 Identities = 205/349 (58%), Positives = 273/349 (78%), Gaps = 9/349 (2%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAKGELEITDLTEQHKETVERLEA 60
           MEFL +YGLFLAK VT+VVA+VAV+V+V +   +    KGEL++T+++E+ K+    L+ 
Sbjct: 1   MEFLYEYGLFLAKAVTIVVAIVAVVVLVLASAVKQKADKGELKLTNVSEELKD----LKH 56

Query: 61  YLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDAKE 120
            L +E   K + KA +K  KAE K++EK     A++ + E+   P +FV+DF GSIDA E
Sbjct: 57  DLKEELLSKKQFKAYEKGLKAEAKAKEK-----AEKADGEAAPTPRVFVIDFKGSIDAHE 111

Query: 121 VASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVA 180
           VASLREE+SAILA+A+ GDEV++ +E+GGGMVHGYGLA+SQLDRL++A +PLTI VDKVA
Sbjct: 112 VASLREEISAILAIAEPGDEVVVNVESGGGMVHGYGLAASQLDRLRSAEIPLTICVDKVA 171

Query: 181 ASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMF 240
           ASGGYMMAC+A+ I +APFAIVGSIGVVAQ+PNF++LLKK+DI++EQ TAG++KRTLT+F
Sbjct: 172 ASGGYMMACVANTIYAAPFAIVGSIGVVAQIPNFNRLLKKHDIDYEQHTAGDFKRTLTLF 231

Query: 241 GENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEIQT 300
           GENTD+ R+KF++ELEETH LFK FI ++RP LD+ KVATGEHW+G QA  LGLVD + T
Sbjct: 232 GENTDEGRQKFQEELEETHVLFKAFISKYRPTLDIAKVATGEHWYGQQALDLGLVDGLST 291

Query: 301 SDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISRGQ 349
           SDD+++   + KTV+ +RY  KKK+ADKLA  A  A + V  +L  + Q
Sbjct: 292 SDDVVMKLAEEKTVIKVRYQLKKKIADKLAHSASLAVNAVFNRLAEKNQ 340