Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., putative periplasmic protease (RefSeq) from Shewanella oneidensis MR-1

 Score =  389 bits (998), Expect = e-113
 Identities = 202/349 (57%), Positives = 270/349 (77%), Gaps = 13/349 (3%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAKGELEITDLTEQHKETVERLEA 60
           MEFL +YG+FLAK VT+VVA+VAV+++V +   +    KGEL IT+ +E+    +E L+ 
Sbjct: 1   MEFLYEYGMFLAKAVTIVVAIVAVIIVVLASTVKHKSDKGELRITNFSEE----LEELKH 56

Query: 61  YLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDAKE 120
            L +E   K + KA +K+ KAE+K++EK     A EGE + K    +FV+DF GSIDA E
Sbjct: 57  SLKEELLTKKQFKAYEKQLKAEEKAKEK-----ADEGESKGK----VFVVDFKGSIDAAE 107

Query: 121 VASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVA 180
           VASLREE+SAIL +A+ GDEV++ +E+GGGMVHGYGLASSQLDRL+ A +PLT+ VDKVA
Sbjct: 108 VASLREEISAILTIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQADIPLTVCVDKVA 167

Query: 181 ASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMF 240
           ASGGYMMAC+A+K+ +APFAIVGSIGVVAQLPNF++LLKK++I++EQ TAG++KRTLT+F
Sbjct: 168 ASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGDFKRTLTVF 227

Query: 241 GENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEIQT 300
           GENTD+ R+KF+QELEETH LFK F+ ++RP LDL KVATGEHW+G QA  LGL+D I T
Sbjct: 228 GENTDEGRQKFQQELEETHVLFKAFVSKYRPQLDLAKVATGEHWYGQQAIELGLIDAIST 287

Query: 301 SDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISRGQ 349
           SDD+++     +TV  LRY  +KKLADK+A  A  + + +  +L+ + +
Sbjct: 288 SDDVLMHLAGERTVYKLRYQVRKKLADKIAHGASLSVNAIFNRLVEKNR 336