Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., minor capsid protein C (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.7 bits (130), Expect = 5e-12
 Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 5/204 (2%)

Query: 141 VLLRLETGGGMVHGYGLASSQLDRLKAAGL-PLTIAVDKVAASGGYMMACIADKIVSAPF 199
           +LL + + GG V G    +  +   +A G  P+    + + AS  YM+     ++++   
Sbjct: 117 ILLDVASPGGTVAGMKELADYIGAERAKGTKPMAAYANGLMASAAYMIGSATGRVLAPAT 176

Query: 200 AIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETH 259
           A VGSIGV++   N+ K  +K  + +  LTAG++K          D  R   ++ L   +
Sbjct: 177 ATVGSIGVISVYENWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQERLTALY 236

Query: 260 QLFKDFIREHR--PALDLDKVATGEHWFGTQAKALGLVDEIQTSDDLIVAACKSKTVLLL 317
           + F D +       A +L   A G+ +  ++A   GLV  I    +  +A   +K + + 
Sbjct: 237 RHFTDGVSASMGLDAANLTTWADGKVFVASEAPQ-GLVTAIVADREAAIATL-AKEMTMD 294

Query: 318 RYTQKKKLADKLAGVAGDAADNVL 341
           R     +  + LA +  +AA+  +
Sbjct: 295 RANLASQHPELLASIEREAAEKAV 318