Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., minor capsid protein C (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 10/205 (4%)

Query: 141 VLLRLETGGGMVHGYGLASSQLDRLKAAGL-PLTIAVDKVAASGGYMMACIADKIVSAPF 199
           VLL +++ GG V G    +  +    A G+ P+    D    S  Y +     ++ +   
Sbjct: 90  VLLAIDSPGGTVDGTRELADWIAARVADGVKPIASYADGTMCSAAYWIGGSTGRVFAPAA 149

Query: 200 AIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMFGENTDKAREKFKQELEETH 259
           AIVGS+GV+    ++ + L+ N I    +TAG  K         +D  +  F+  ++  +
Sbjct: 150 AIVGSVGVLWMHYDWSQYLETNGIRATYITAGSRKAAGAPEAPLSDNDKAYFQHLIDTAY 209

Query: 260 QLFKDFIREHRPALDLDKV-----ATGEHWFGTQAKALGLVDEIQTSDDLIVAACKSKTV 314
             F D +      + LD+      A G+ +  T+A ALGLV  I   D     A  S+ V
Sbjct: 210 TQFLDGV---SAPMGLDRANPAAWADGQVFRATEALALGLVTAI-VPDLAGAVAALSQEV 265

Query: 315 LLLRYTQKKKLADKLAGVAGDAADN 339
            +       K  + +A +  +A +N
Sbjct: 266 HMDAKELAAKYPEAVAAIRNEAEEN 290