Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., signal peptide peptidase A from Caulobacter crescentus NA1000

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 3/161 (1%)

Query: 141 VLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVAASGGYMMACIADKIVSAPFA 200
           ++ R+ + GG         + L   K AG P+ +++   AASGGY ++  AD I++ P  
Sbjct: 345 IVFRVSSPGGSDTASEQILAALQAAKKAGKPVVVSMGTYAASGGYWISSQADSIIAQPST 404

Query: 201 IVGSIGVVAQLPNFHKLLKKNDIEFEQLTAG-EYKRTLTMFGENTDKAREKFKQELEETH 259
           + GSIGV        + L +  ++ + L  G +Y +        T + R KF   ++  +
Sbjct: 405 LTGSIGVYGGKFAIGEALARFGVDTKDLHVGADYSQAFGAGEGFTPEQRAKFAGWMDRIY 464

Query: 260 QLFKDFIREHR--PALDLDKVATGEHWFGTQAKALGLVDEI 298
             F   + E R  P   + ++A G  W G QAK LGLVDE+
Sbjct: 465 AGFITRVAEGRNLPPAKVREIAKGRVWTGEQAKQLGLVDEL 505



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 185 YMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLT--MFGE 242
           YM+     +    P +   ++G+ ++   F +   K  ++ E     EYK  +   +  +
Sbjct: 140 YMLGAATSEFWMQPDSSFQAVGISSESMFFKRFFDKYGVKAEYEQRYEYKNAVNPYLHSD 199

Query: 243 NTDKAREKFKQELEETHQ--LFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEI-Q 299
            T   RE     +   ++  L    +   +    L K   G  +   +A+A GL+D++ Q
Sbjct: 200 YTPAHRESTLSWMGSVYRTALTSAAVDRKQDPTKLMKTLEGGPYIAQEAQAKGLIDKVGQ 259

Query: 300 TSD 302
            SD
Sbjct: 260 VSD 262