Pairwise Alignments

Query, 353 a.a., protease SohB from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., putative periplasmic protease (RefSeq) from Shewanella sp. ANA-3

 Score =  387 bits (995), Expect = e-112
 Identities = 202/352 (57%), Positives = 272/352 (77%), Gaps = 14/352 (3%)

Query: 1   MEFLLDYGLFLAKIVTVVVALVAVLVIVKSLGGRSGGAKGELEITDLTEQHKETVERLEA 60
           MEFL +YG+FLAK VT+VVALVAV+++V +   +    KGEL IT+L+E+    +E L+ 
Sbjct: 1   MEFLYEYGMFLAKAVTIVVALVAVIIVVLASTVKHKSDKGELRITNLSEE----LEELKH 56

Query: 61  YLHDEAFLKARDKADKKKEKAEQKSREKSLKQAAKEGELESKRDPHLFVLDFHGSIDAKE 120
            L +E   K + KA +K+ KA++K++EK+ ++ +K           +FV+DF GSIDA E
Sbjct: 57  SLKEELLSKKQFKAYEKQLKADEKAKEKTAEEDSKG---------KVFVIDFKGSIDAAE 107

Query: 121 VASLREEVSAILAVAQAGDEVLLRLETGGGMVHGYGLASSQLDRLKAAGLPLTIAVDKVA 180
           VASLREE+SAIL +A+ GDEV++ +E+GGGMVHGYGLASSQLDRL+ A +PLTI VDKVA
Sbjct: 108 VASLREEISAILTIAEKGDEVVVNVESGGGMVHGYGLASSQLDRLRQAEIPLTICVDKVA 167

Query: 181 ASGGYMMACIADKIVSAPFAIVGSIGVVAQLPNFHKLLKKNDIEFEQLTAGEYKRTLTMF 240
           ASGGYMMAC+A+K+ +APFAIVGSIGVVAQLPNF++LLKK++I++EQ TAG++KRTLT+F
Sbjct: 168 ASGGYMMACVANKVYAAPFAIVGSIGVVAQLPNFNRLLKKHEIDYEQHTAGDFKRTLTVF 227

Query: 241 GENTDKAREKFKQELEETHQLFKDFIREHRPALDLDKVATGEHWFGTQAKALGLVDEIQT 300
           GENTD+ R+KF+QELEETH LFK F+ ++RP LDL KVATGEHW+G QA  LGL+D I T
Sbjct: 228 GENTDEGRQKFQQELEETHVLFKAFVSKYRPQLDLAKVATGEHWYGQQAIELGLIDAIST 287

Query: 301 SDDLIVAACKSKTVLLLRYTQKKKLADKLAGVAGDAADNVLLKLISRGQRPL 352
           SDD+++     +TV  LRY  +KKLADK+A  A  + + +  +L+ +  RP+
Sbjct: 288 SDDVLMQLAGERTVYKLRYQVRKKLADKIAHGASLSVNAIFNRLVEK-NRPM 338