Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  508 bits (1307), Expect = e-148
 Identities = 316/706 (44%), Positives = 409/706 (57%), Gaps = 31/706 (4%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F E+VGQ+HVL AL NAL   RLHHAYLF+GTRGVGKTTI R+ AK
Sbjct: 1   MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
            LNCETGIT+TPCG+C+ C+EID+GRFVDL+EIDAASRTKVEDTRELLDNVQY P+RGRF
Sbjct: 61  CLNCETGITSTPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLS HSFNALLKTLEEPP YVKF+LATTDPQKLP TILSRCLQF LK ++ 
Sbjct: 121 KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E + + L  VL  E +  +  AL LL  AADGSMRDA+SLTDQAIA G G V +  V  M
Sbjct: 181 ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD      +L A+     +A+++ +  LA+ G +W+G+L ++   LHR+A+ QALP 
Sbjct: 241 LGTLDHGQVYDVLHALIEGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE 300

Query: 301 TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP 360
            +D    +  R+ +LA+ L  +DVQ YYQ+ L GR+DLPL+P  R G EM++LRM+AFRP
Sbjct: 301 GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP 360

Query: 361 SHVSLASVIVPPNTAVTAPTIAAPTSQMA---AAAPQPQPVAQSNVSQSASQAMPHPVAP 417
           +  + A     P  A+    I+  T+  A   AAAP   P   S    SA  A   PVAP
Sbjct: 361 ADTADA-----PRQALKPVGISQATADSAKPVAAAPVVAPAVASAPVASAPVAPVAPVAP 415

Query: 418 ----PMMAA-----QPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRH 468
               P++AA     +P+VE A+P    EA   ++ P    +     Q  A  P L  +  
Sbjct: 416 ATPTPVVAAPEPEPEPIVE-ALPEPVAEA--VVDLPWNDPIEPEVVQQPAVEPVLETIAE 472

Query: 469 QLRSKRQEVQNKGADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQ 528
           Q       +     D    DA     A   E        V V+    D+D+  P +E Y 
Sbjct: 473 QPELPPMPLPT--PDSVVPDAPEWVAAPVPE---PTVADVDVATPGIDQDDEPPLDEDY- 526

Query: 529 WRPMQPIEVAVKSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVE 588
              ++P   +  S +     + A E    PE     +        W  L  +L  + M  
Sbjct: 527 ---IEPDLDSAYSYLDDLASEHAAEPAPEPEPEPAAMPATGLALQWLELFPKLPISGMTG 583

Query: 589 QLALNSAFVR-QGDQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNI-TVGQEGE 646
            +A N   +  +GD   L L P+H+ L N   Q+ L  ALN       +L I  +  E E
Sbjct: 584 SIAANCTLMAVEGDHWLLHLDPAHSALFNATQQRRLNDALNQYHQRTLTLTIELIKPEQE 643

Query: 647 TPLELRERLYQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
           TP +   R    +   A  S+  DP +Q + ++F A +  D++ P+
Sbjct: 644 TPAQAASRRRADRQREAEESIHGDPFIQQMMQQFGAVVRHDTIEPV 689