Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., DNA polymerase III subunits gamma and tau from Sinorhizobium meliloti 1021

 Score =  243 bits (620), Expect = 2e-68
 Identities = 165/468 (35%), Positives = 242/468 (51%), Gaps = 19/468 (4%)

Query: 2   SYLALARKWRPTRFSEV-VGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           +Y  LARK+RP  FS++ VGQ  ++  L NA    R+  AY+ +G RGVGKTT  R+ A+
Sbjct: 19  AYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILAR 78

Query: 61  GLNCETGITATPCGQCAT----CQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPA 116
            LN +T     P          CQ I  GR VD++E+DAAS T ++D RE+++ V+Y+P 
Sbjct: 79  ALNYKTAEIDKPTIDLRVPGEHCQAIMDGRHVDVIEMDAASHTGIDDIREIIEQVRYRPV 138

Query: 117 RGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLK 176
             R+KVY+IDEVHMLS  +FN LLKTLEEPPE+VKF+ ATT+ +K+P+T+LSRC +F L+
Sbjct: 139 SARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLR 198

Query: 177 PISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDI 236
            IS  ++      +L  E +  D +AL ++A AA+GS RD LSL DQAIA G G V+ + 
Sbjct: 199 RISASDLVGLFSTILGKEGVPFDPEALAMVARAAEGSARDGLSLLDQAIAHGGGSVEIET 258

Query: 237 VAHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQ 296
           V  MLG  D    + L + +        +D      + G     +L  L+   H +   +
Sbjct: 259 VRSMLGLADRARIVDLFEHVIKGDVAGALDEFAAQYEAGANPTVVLTDLADFTHLVTRLK 318

Query: 297 ALP-ATLDKSLPEASRIE--SLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLML 353
            +P A  D+SL E  R      A ++A   +   +Q+ LKG  +   S       EM+++
Sbjct: 319 YVPDAVNDQSLSEIERTRGAEFAGSVAVTTLSRVWQMLLKGIPEAESSARPAGAAEMVLI 378

Query: 354 RM--MAFRPSHVSLASVIVPPNTAVTA--PTIAAPTSQMAAAAPQPQPVAQSNVSQSASQ 409
           R+   A  PS    A  ++  +       P          A AP   PV    V  + S+
Sbjct: 379 RLAHAAHLPSPEEAARRLLDLSGGEGGGRPAPNGGGGGGGAQAPAGTPVEARAVETAVSR 438

Query: 410 AMPHPVAPPMMAAQPVVESAVPVT-----QREASHSINAPEASVVTNT 452
             P      M+ A P      P++     +R  + +   PE  V  N+
Sbjct: 439 --PSGNGATMLRAVPSSAPPQPISVGRIEERTVASAAAKPEPKVPVNS 484