Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., DNA polymerase III, gamma/tau subunits from Phaeobacter inhibens DSM 17395

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 98/366 (26%), Positives = 149/366 (40%), Gaps = 55/366 (15%)

Query: 12  PTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIG-RLFAKGLNCETGITA 70
           P     + GQ+        A   +RLHH +L +G +GVGK T+  R+ A  L+      A
Sbjct: 19  PRETLHLFGQAQAEQDFLTAFNSDRLHHGWLLTGPQGVGKATLAWRIAAFLLSQPPAEDA 78

Query: 71  TPCGQCATCQEIDQG-------RFVDLLEIDAASRTK-VEDTRELLDNVQYKPAR----- 117
              G       +D G       R   L E   AS T+ V D  +L D +     R     
Sbjct: 79  GLFGAPPPATSLDIGMDHPVMHRIQALAEPGLASITRSVNDKGKLRDQIVVDDIRALNKF 138

Query: 118 -------GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRC 170
                  G  +V ++D    ++  + NALLK LEEPP     LL +  P +L  TI SRC
Sbjct: 139 FGLSATDGGRRVVIVDAADEMNTSAANALLKMLEEPPARTTLLLVSHQPSRLLPTIRSRC 198

Query: 171 LQFHLKPISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNG 230
                 P+S E++Q  L      +  +   +    LA  A+GS+  AL L    + LG  
Sbjct: 199 RLLRFAPLSPEDMQAAL-----TQAGAELPRQAEHLAALANGSVGAALRL----LNLGGL 249

Query: 231 VVKSDIVAHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNG--VEWDGLLQQLSTQ 288
              SD+V              LL ++     Q  M   E  A  G   +++ LL  + T 
Sbjct: 250 QAYSDVV-------------RLLDSMPRLDRQRAMTLAEQAAARGGADKFELLLTLIDTA 296

Query: 289 LHRIAMYQA--LPATLDKSLPEASRIESLAKTLAPQDVQLYYQIA------LKGRQDLPL 340
           L R+A   A  +    + +  EA+ +  L+ T  PQ  + +  +A      ++  Q + L
Sbjct: 297 LARLARTGATGMAPQPEAAPQEAAVLSRLSPT--PQKARAWADLAAQVTARMRHGQAVNL 354

Query: 341 SPTARI 346
            P A +
Sbjct: 355 DPAALV 360