Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., DNA polymerase III subunit tau from Phaeobacter inhibens DSM 17395

 Score =  268 bits (684), Expect = 7e-76
 Identities = 163/424 (38%), Positives = 237/424 (55%), Gaps = 16/424 (3%)

Query: 3   YLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGL 62
           Y  LARK+RP  F+++VGQ  ++  L+NA A +R+  A++ +G RG GKTT  R+ AKG+
Sbjct: 14  YQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTTARIIAKGM 73

Query: 63  NC-----ETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPAR 117
           NC     + G T  PCG+C  C  I +GR VD++E+DAASRT V D RE++D+VQY+ A 
Sbjct: 74  NCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDIREIIDSVQYRAAS 133

Query: 118 GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKP 177
            R+K+Y+IDEVHMLS  +FNALLKTLEEPP +VKF+ ATT+ +K+PVT+LSRC +F L+ 
Sbjct: 134 ARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRR 193

Query: 178 ISVENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIV 237
           I  E +   L K+  AE       AL L+  AA+GS RDA SL DQAI+ G G   +D V
Sbjct: 194 IEPEVMIGLLQKIAGAENAQIAEDALALITRAAEGSARDATSLLDQAISHGAGETTADQV 253

Query: 238 AHMLGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQA 297
             MLG  D    L L+  I      A +  +      G +   +L+ L+   H +++ + 
Sbjct: 254 RAMLGLADRGRVLDLIDMILRGDAAAALTELSAQYAEGADPLAVLRDLAEITHWVSVVKI 313

Query: 298 LPATLDK---SLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLR 354
            P   +    S  E +R   +A+ L  + +   +Q+ LK  +++  +P A +  EM ++R
Sbjct: 314 TPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKALEEVAAAPNAMMAAEMAVIR 373

Query: 355 MMAFRPSHVS-LASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPH 413
           +     +HV+ L +      T    P    P+  M   AP       S   Q A   +P 
Sbjct: 374 L-----THVADLPTPEQLMRTLQDTPPPPPPSGHM--NAPMGSSGGPSGAPQGAGGYVPQ 426

Query: 414 PVAP 417
              P
Sbjct: 427 QPGP 430