Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA polymerase III, delta'' subunit from Dechlorosoma suillum PS

 Score = 81.6 bits (200), Expect = 5e-20
 Identities = 81/279 (29%), Positives = 120/279 (43%), Gaps = 40/279 (14%)

Query: 36  RLHHAYLFSGTRGVGKTTIGRLFAKGLNCET-GITATPCGQCATCQEIDQGRFVDLLEID 94
           +L HA L  G RGVGK  + R FA GL CE  G+    CGQC+ C  + QG   D   + 
Sbjct: 20  QLPHALLLIGQRGVGKFELARAFAAGLLCEAPGMDGHACGQCSACNWLGQGNHPDFRLVQ 79

Query: 95  AASRTK-------------------VEDTRELLDNVQYKPARGRFKVYLIDEVHMLSRHS 135
            A+ +                    ++  R L D +     R   ++ L+     ++R++
Sbjct: 80  PAAMSDEEAEADEETGKKKPSQQITIDQVRGLDDFLHVGTHRQGVRIVLLHPAEAMNRNT 139

Query: 136 FNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISVENIQQQLDKVLHAEQ 195
            NALLK+LEEP     FLL +++  +L  TI SRC    +   S     Q     L A++
Sbjct: 140 ANALLKSLEEPRPDTLFLLVSSEADRLLPTIRSRCQTVEVPLPS----PQAATAWLAAQK 195

Query: 196 ISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHMLGTLDTDHSLHLLQA 255
           +S   + L L    A G+ R A  L       G+G  +  ++  +LG L     L  + A
Sbjct: 196 VSDGGRWLAL----AGGAPRLAAELA------GSG--QRSLLDALLGQLQKGRQLDPIAA 243

Query: 256 ISLQTPQAVMDCIETLA-QNGVEWDGLLQQLSTQLHRIA 293
            +L       D    L  +  VEW   LQ+ S  L  +A
Sbjct: 244 AALIEKTLKADKSGALTMKRTVEW---LQKWSADLALVA 279