Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., DNA polymerase III, subunit gamma/tau from Dechlorosoma suillum PS

 Score =  416 bits (1070), Expect = e-120
 Identities = 217/421 (51%), Positives = 285/421 (67%), Gaps = 13/421 (3%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  FS +VGQ HV+ AL +AL + RLHHAYLF+GTRGVGKTT+ R+ AK
Sbjct: 1   MSYQVLARKWRPRSFSTLVGQEHVVRALTHALTEQRLHHAYLFTGTRGVGKTTLARILAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
            LNCE+GI+ATPCGQC+ CQEID GRFVDLLE+DAA+ T+V++ R+LL+N  Y P RGRF
Sbjct: 61  SLNCESGISATPCGQCSACQEIDAGRFVDLLEVDAATNTRVDEMRQLLENAVYAPTRGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVY+IDEVHMLS  +FNA+LKTLEEPPE+VKF+LATTDPQK+PVT+LSRCLQF+LK +  
Sbjct: 121 KVYVIDEVHMLSNSAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           + I   L  +L AE +  ++ AL LLA +A+GSMRDALSL DQAIA G G V+  +V  M
Sbjct: 181 QAITGHLSHILEAESVPFEAPALALLARSANGSMRDALSLLDQAIAHGTGKVEESLVRDM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGT+D D+   LL+A++     A++   + + +  + +D  LQ L+  L R+ + Q  PA
Sbjct: 241 LGTVDQDYLFTLLEAMAQGDVSAMLSVADLMTERSLSFDSALQDLAAMLTRLQVAQLAPA 300

Query: 301 TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP 360
            + +  P+ SR+ +LA  +  Q VQL YQI++ GR +LP++P    G  M +LR+ AF P
Sbjct: 301 AIAEDTPDRSRLLALAGAIDAQTVQLAYQISVHGRHELPMAPDPHAGFVMTLLRLHAFAP 360

Query: 361 SHVSLASVIVPPNTAVTAPTIAAPTSQMA----------AAAPQPQPVAQSNVSQSASQA 410
                      P  A+ AP   AP  + A          A AP  QPVA    +  A+QA
Sbjct: 361 RQPGEGP---SPGKALAAPRAQAPAVKAAPSRISVPARTAEAPVVQPVAAPAETMPAAQA 417

Query: 411 M 411
           +
Sbjct: 418 V 418



 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 23/202 (11%)

Query: 493 TPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAVKSEVTPTQLKKAL 552
           +P  AL     +A  V+ +P R        E  + Q        VA  +E  P     A 
Sbjct: 368 SPGKALAAPRAQAPAVKAAPSRISVPARTAEAPVVQ-------PVAAPAETMPAAQAVAA 420

Query: 553 EHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFVRQGDQI-SLTLRPSH 611
           + E              A   W +++  L+ + M   LA +   ++ G+++  L L P+H
Sbjct: 421 DSE--------------APGDWQSILDSLQLSGMARALAQHCELLKLGEEVVQLRLPPAH 466

Query: 612 AHLHNEKAQQELEQALNHVLGEACSLNITVGQEGE-TPLELRERLYQQKLTSALHSLQTD 670
            HL  + AQ  L+QAL    G    L I V +    TP  + ++  +++   A+ +++ D
Sbjct: 467 RHLIMKAAQDRLQQALGEYCGRPLQLQIEVAEVSTLTPAAILQQEREERQDRAVAAIEQD 526

Query: 671 PNVQFIERRFNAQLDSDSVRPI 692
           P V+ +   F+A L   S++PI
Sbjct: 527 PFVREVIDIFDATLIESSIKPI 548