Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  251 bits (641), Expect = 8e-71
 Identities = 149/370 (40%), Positives = 210/370 (56%), Gaps = 7/370 (1%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MS   L  ++RP  F+EV GQ  V   L  A A++R+  AYLFSGTRGVGKTTI R+ AK
Sbjct: 1   MSNAPLTARYRPQTFAEVAGQETVKAILSRAAAEDRVAPAYLFSGTRGVGKTTIARILAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
            LNCE   T  PC  C  C+++  G  VD++EID AS   +ED R L + + Y P  GR+
Sbjct: 61  ALNCEKAPTGEPCNTCEQCRKVVMGNHVDVVEIDGASNRGIEDARRLREAIGYAPMEGRY 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KV++IDE HML+R +FNALLKTLEEPP  V F+LATT+P K PVTI+SRC  F  K +  
Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPPRVTFVLATTEPHKFPVTIISRCQHFTFKRLPE 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
             ++  L  VL  E    D  A+ L+A  A GS+RD++SL  Q +ALG   +  +    +
Sbjct: 181 NELEAHLTGVLTREGQDFDPAAVRLIARRAAGSVRDSMSLLGQVLALGGDRLTVEGARGV 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQ---- 296
           LG    +    ++QA++ Q   AV   +  L   GV+    L++L++    + M +    
Sbjct: 241 LGLAGQELFFEVMQALASQDCVAVSAVVRDLLDKGVDIGFFLRELASTWRNLFMLRQAGE 300

Query: 297 -ALPATLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRM 355
            ALPA LD    EA +    A       +   +Q+ L+G++ +  S    + +E+L+L  
Sbjct: 301 AALPA-LDLPEEEARQWLEWAPKFEITHIHACWQMTLEGQRRVLTSLEPAMALELLLLN- 358

Query: 356 MAFRPSHVSL 365
           +A  P  VSL
Sbjct: 359 LAMLPRLVSL 368