Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 28/230 (12%)

Query: 9   KWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGI 68
           K+RP   SEVVG   ++  L N + +  + H  LFSG+ GVGKTT     AK L  +T  
Sbjct: 8   KYRPETLSEVVGHHEIIKRLTNYVEKKSMPHL-LFSGSPGVGKTTAALALAKDLYGDTW- 65

Query: 69  TATPCGQCATCQEIDQGRFVDLLEIDAAS----RTKVEDTRELLDNVQYKP-ARGRFKVY 123
                          +  F++L   D       RTKV+D        + KP     FKV 
Sbjct: 66  ---------------RENFLELNSSDERGIDVIRTKVKDF------ARTKPIGDAPFKVI 104

Query: 124 LIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISVENI 183
            +DE   L+  + NAL +T+E+  +  +F+L+   P K+   I SRC  F   P+  E++
Sbjct: 105 FLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDL 164

Query: 184 QQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVK 233
            + L  +   E ++ +   ++ + + ++G MR A+++   A A+ + + +
Sbjct: 165 VENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTAAAVSDEITE 214