Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., DNA polymerase III subunit gamma/tau from Klebsiella michiganensis M5al

 Score =  612 bits (1579), Expect = e-179
 Identities = 346/695 (49%), Positives = 449/695 (64%), Gaps = 65/695 (9%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MSY  LARKWRP  F++VVGQ HVLTAL N L+  R+HHAYLFSGTRGVGKT+I RL AK
Sbjct: 1   MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
           GLNCETGITATPCG C  C+EI+QGRFVDL+EIDAASRTKVEDTR+LLDNVQY PARGRF
Sbjct: 61  GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KVYLIDEVHMLSRHSFNALLKTLEEPP +VKFLLATTDPQKLPVTILSRCLQFHLK + V
Sbjct: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
           E I+ QL+ +L AEQI+ + +AL LL+ AADGS+RDALSLTDQAIA G+G + ++ V+ M
Sbjct: 181 EQIRHQLEHILGAEQIAFEPRALQLLSRAADGSLRDALSLTDQAIASGDGRLTAESVSAM 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA 300
           LGTLD D +L L++A+ +   + VM  +   A  GVEW+ LL ++ + LHRIAM Q  P+
Sbjct: 241 LGTLDDDQALSLIEALVVADGERVMAGVNEAAARGVEWEALLVEMQSLLHRIAMVQLSPS 300

Query: 301 TLDKSLPEAS-RIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFR 359
            L   +     R+  LA+T+ P DVQLYYQ  L GR++LP +P  R+G+EM +LR +AF 
Sbjct: 301 ALGADMAAIELRMRELARTVPPTDVQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH 360

Query: 360 PSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQSNVSQSASQAMPHPVAPPM 419
           P  + L     PP  A+     AAP  Q    +  P P    N+ Q+ SQ         +
Sbjct: 361 P-RMPLPEPEAPPMPAIQ----AAPVQQAVPESAPPPP----NLPQTTSQ---------V 402

Query: 420 MAAQPVVESAVPVTQREASHSINAPEASVVTNTDTQSQASMPALAGLRHQLRSKRQEVQN 479
           +AA+         +Q + S     P            + S PA A       S+ + V N
Sbjct: 403 LAAR---------SQLQRSQGAPTP------------KKSEPAAA-------SRARPVNN 434

Query: 480 KGADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAV 539
                           +ALER++   ++VQ  P     ++   ++E Y+W+    +E   
Sbjct: 435 ----------------AALERLSSITERVQARPAAAALEKAPAKKEAYRWKSTTVVETVK 478

Query: 540 KSEVTPTQLKKALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFVRQ 599
           +   TP  LKKALEHEKTPE+ AKL  EAV +D+W+A V +L   K+VEQ+ALN+   ++
Sbjct: 479 EEVATPKALKKALEHEKTPELAAKLAVEAVERDSWAAEVSQLAVPKLVEQVALNAWKEQE 538

Query: 600 GDQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEG--ETPLELRERLYQ 657
           G+++ L LRPS  HL++  AQQ+L +AL  + G +  L I         TPLE R+ +Y+
Sbjct: 539 GNRVCLHLRPSQRHLNSAGAQQKLAEALGILYGTSVELTIVEDDNPAMRTPLEWRQAIYE 598

Query: 658 QKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI 692
           +KL  A  ++  D N+Q + R F+A LD +S+RPI
Sbjct: 599 EKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI 633