Pairwise Alignments

Query, 692 a.a., DNA polymerase III subunit gamma/tau from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  278 bits (712), Expect = 4e-79
 Identities = 167/438 (38%), Positives = 239/438 (54%), Gaps = 10/438 (2%)

Query: 1   MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK 60
           MS+ +L  ++RP  F+EV GQ  V   L  A  +NR+  AYLFSGTRGVGKTTI R+FAK
Sbjct: 1   MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60

Query: 61  GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF 120
            LNC T  T  PC  C  C+++ QG  VD++EID AS   ++D + L + + Y P  GR+
Sbjct: 61  ALNCTTAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120

Query: 121 KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV 180
           KV++IDE HML+R +FNALLKTLEEPP  V F+LATT+P K PVTI+SRC  F    +S 
Sbjct: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180

Query: 181 ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM 240
             ++  L KVL  E +  D  A+ L+A  A GS+RD++SL  Q +ALG   +  D    +
Sbjct: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240

Query: 241 LGTLDTDHSLHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMY----Q 296
           LG    +  L L++A++ Q    V + +  L   GV+    L++L      + M     +
Sbjct: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAGE 300

Query: 297 ALPATLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMM 356
           A  A+LD    EA +    AK   P  +   +Q+ L+G++ +  S    + +E+L+L  +
Sbjct: 301 AALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAMALELLLLN-L 359

Query: 357 AFRPSHVSLASVIVPPNTAVTAPTIAA---PTSQMAAAAPQPQPVAQSNVSQSASQAMPH 413
           A  P  + + S + P     +AP+ +A   P S  AA  P P        + +A    P 
Sbjct: 360 AMLPRLMPVES-LRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGMQGTAPAAGMT-PS 417

Query: 414 PVAPPMMAAQPVVESAVP 431
           P AP   A        VP
Sbjct: 418 PAAPATPAPSAAPSPRVP 435