Pairwise Alignments

Query, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., Serine phosphatase RsbU, regulator of sigma subunit from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (281), Expect = 1e-29
 Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 17/284 (5%)

Query: 27  ILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDHEPDLILCDLSMPVLNGIEF 86
           +L++DDD V R     YL+  G+ V++A NG  GL+     +PDL++CDL MP + G+E 
Sbjct: 8   LLIIDDDEVVRASLAAYLEDSGFSVLQASNGQQGLQVFEQDKPDLVICDLRMPQMGGLEL 67

Query: 87  VEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEKVLAND-- 144
           + +V+      P++VVS    M D  +ALR G  D+L KP+ + + L  ++ + L     
Sbjct: 68  IRQVTEISSQTPVIVVSGAGVMNDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDRSRL 127

Query: 145 --DHQRDFASCWYGADRQGSIPEEQELHWHLQYLKDNPNAAKELLEALLPEKDSQLGSWK 202
             ++QR          R+      +EL   L  L+++ NA +++   +LP     +  ++
Sbjct: 128 LVENQR---------YREKLETANRELEASLNLLQEDQNAGRQVQMNMLPVSPWTVDDFR 178

Query: 203 CSYRLLQSAELMPLVFDYAWLMNGQFVFYVVDAASHRECGAASTLLVR----ALFHDYLR 258
            +++++ S  L     DY  +   +  FY+ D + H    A  T+L++     L  +  R
Sbjct: 179 FAHQIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLFESKR 238

Query: 259 NLRNFSVELKDLAEIIERGIHCSECIGKVSALFGVADLADGTLS 302
           N      +  ++   I RG+   +    V+ + GV D   G L+
Sbjct: 239 NGTLPEFKPSEVLGHINRGLISCKLGKHVTMVGGVIDEETGLLT 282