Pairwise Alignments

Query, 368 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 1e-30
 Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 7/236 (2%)

Query: 27  ILLVDDDPVFRRMTKGYLQKYGYQVIEAENGLDGLRKLRDHEPDLILCDLSMPVLNGIEF 86
           IL V+DDPVFR++   +L   G QV++A +G  GL   +    D+IL DLSMP L G++ 
Sbjct: 8   ILWVEDDPVFRQIVATFLSGRGAQVVQAGDGEQGLIHFKQQRFDIILADLSMPKLGGLDM 67

Query: 87  VEEVSSSYPSLPLVVVSATEEMADVAKALRFGIKDFLPKPITNHSHLASAIEKVLANDDH 146
           ++E+S   P +P +V+S    MADV +ALR G  D+L KP+ +   +  AI++ L    H
Sbjct: 68  LKEMSKLEPLVPSIVISGNNVMADVVEALRIGACDYLVKPVADLFIIEQAIQQGLQR--H 125

Query: 147 QRDFASCWYGADRQGSIPEEQELHWHLQYLKDNPNAAKELLEALLPEKDSQLGSWKCSYR 206
           Q D  S          +   QEL  +L  L+ +  AAK++ + L P  +    + K  Y 
Sbjct: 126 QLDDIS-----QTDLDVLSHQELSDNLTILEQSVEAAKQVQQQLFPASNISYPAAKVDYS 180

Query: 207 LLQSAELMPLVFDYAWLMNGQFVFYVVDAASHRECGAASTLLVRALFHDYLRNLRN 262
           L +S+++     D   + +   + Y+          A + +L+R+  +  L++ R+
Sbjct: 181 LFKSSDISSYFIDSTMVGSDYLIMYMAHLYPEDNRAAFACVLLRSFVNQKLKSYRS 236